Index

_

__getitem__() (streq.circular.Circular method)

B

base2regex (streq.utils.SequenceCollection attribute)

C

Circular (class in streq.circular) complement() (in module streq.seqtools)

complementer (streq.utils.SequenceCollection attribute) correlation() (in module streq.distance) count_re_sites() (in module streq.seqtools)

D

DNA (streq.utils.SequenceCollection attribute)

F

find_iupac() (in module streq.seqtools)

G

gc_content() (in module streq.seqtools)

H

hamming() (in module streq.distance)

L

levenshtein() (in module streq.distance)

M

module streq streq.circular streq.distance streq.seqtools streq.utils

P

PAMs (streq.utils.SequenceCollection attribute)

purine_content() (in module streq.seqtools) pyrimidine_content() (in module streq.seqtools)

R

ratcliff_obershelp() (in module streq.distance) re_sites (streq.utils.SequenceCollection attribute)

reverse() (in module streq.seqtools) reverse_complement() (in module streq.seqtools) RNA (streq.utils.SequenceCollection attribute)

S

SequenceCollection (class in streq.utils) streq module streq.circular module

streq.distance module streq.seqtools module streq.utils module

T

to_dna() (in module streq.seqtools)

to_rna() (in module streq.seqtools)

W

which_re_sites() (in module streq.seqtools)